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SRX3575988: Mapped reads for uncultivated Halieaceae bacterium UBA8310 genome recovered from ERX289008
1 ILLUMINA (Illumina HiSeq 2000) run: 96,787 spots, 19.8M bases, 10.6Mb downloads

Design: Reads from ERX289008 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA8310 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Halieaceae bacterium UBA8310 genome recovered from ERX289008
SAMN08020093 • SRS2845872 • All experiments • All runs
Organism: Halieaceae bacterium
Library:
Name: UBA8310_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 96,787 spots, 19.8M bases, 10.6Mb
Run# of Spots# of BasesSizePublished
SRR648590996,78719.8M10.6Mb2018-02-23

ID:
4961490

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